Overview
Implementation of the RISE GVAX Project, which includes supporting human resources technical assistance to partners.
Responsibilities
Engage with NICD users and assist with next-generation sequencing (NGS) data analysis
Perform basic and advanced analysis and interpretation on data produced from next generation sequencing systems (e.g. Illumina, PacBio or Ion torrent platforms) as well as develop, improve, modify, and operate data analysis pipelines
Conduct and initiate research in the area of NGS data analysis
Work closely with researchers and collaborators to generate/provide data analysis reports, project reports and perform custom analysis as requested
Participate in training employees or staff with bioinformatics skills and build confidence amongst users to analyze and understand their own data resulting in improved and effective research outcomes
Perform a total Data Quality Management of the facility which involves the implementation and monitoring of systems to ensure accurate and reliable results
Monitor and manage bioinformatics requests or projects to ensure objectives are achieved in terms of turnaround times, cost control, quality and service
Responsible for overseeing and monitoring of software tools and data resources to ensure smooth operation of the sequencing facility
Develop and implement costing model for Bioinformatics solutions
Troubleshooting of sequencing runs. Maintain hardware and software infrastructure
Establish strong collaborative links with experts in the area of bioinformatics.
Required Qualifications
MSc in Bioinformatics, Computer Science or related relevant field/PhD desirable.
Experience with working in a Linux/UNIX environment on high performance computing environments
Installing and patching firmware for informatics app/tools
Strong scripting experience including proficiency with a scripting language (e.g. Python, Java, Perl, R)
Project Management knowledge
Experience with TCP/IP, cloud computing, HyperV, and containers
Have proven ability in formulating and/or implementing high-level informatics solutions
Project management, financial management and costing skills
Innovation and problem-solving skills
Bioinformatics, molecular biology, NGS experience will be an added advantage
Ability to write successful grant applications and reports to funders and to publish findings in scientific journals
Ability to work with others including international collaborators and to manage junior staff and students.
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